Browse of TCMCG006C48257 protein

CDS

Accession Number	TCMCG006C48257
gbkey	CDS
Protein Id	XP_013734255.1
Location	join(11461832..11462066,11462241..11462503,11462587..11462733,11462814..11462975,11463054..11463137,11463221..11463291,11463370..11463727,11463798..11463953,11464016..11464113,11464187..11464235,11464344..11464496,11464571..11464714,11464805..11464898,11465153..11465320,11465393..11465621,11465728..11465782,11465866..11465971,11466062..11466181,11466456..11466553,11466667..11466915)
Gene	LOC106437814
GeneID	106437814
Organism	Brassica napus

Protein

Length	1012aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_013878801.2
Definition	putative transcription elongation factor SPT5 homolog 2 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Transcription elongation factor Spt5
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15172        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003677        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003729        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006351        [VIEW IN EMBL-EBI] GO:0006354        [VIEW IN EMBL-EBI] GO:0006355        [VIEW IN EMBL-EBI] GO:0006357        [VIEW IN EMBL-EBI] GO:0006366        [VIEW IN EMBL-EBI] GO:0006368        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006397        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008023        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009058        [VIEW IN EMBL-EBI] GO:0009059        [VIEW IN EMBL-EBI] GO:0009889        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0010468        [VIEW IN EMBL-EBI] GO:0010556        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016071        [VIEW IN EMBL-EBI] GO:0018130        [VIEW IN EMBL-EBI] GO:0019219        [VIEW IN EMBL-EBI] GO:0019222        [VIEW IN EMBL-EBI] GO:0019438        [VIEW IN EMBL-EBI] GO:0031323        [VIEW IN EMBL-EBI] GO:0031326        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032044        [VIEW IN EMBL-EBI] GO:0032774        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034645        [VIEW IN EMBL-EBI] GO:0034654        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044249        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044271        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044451        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050794        [VIEW IN EMBL-EBI] GO:0051171        [VIEW IN EMBL-EBI] GO:0051252        [VIEW IN EMBL-EBI] GO:0060255        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0080090        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:0097659        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901362        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1901576        [VIEW IN EMBL-EBI] GO:1903506        [VIEW IN EMBL-EBI] GO:2000112        [VIEW IN EMBL-EBI] GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCTCACCACTCAGACTCCGACGACGAAGACTACTCCTACGACGATGAGTCCGAGTTCGACGAGGAAGAAGAAGAAGAACCGAGAAGTTCACGGAAGAAGAGGGGAAGATCAAACCCAGACTCCGTCCCCGGCGGCGCGCGTGGGAAGAAAAGAAAGCCTTCGGGCTCCATATTCATAGAGGATGACGTCATCGTAGATGACGAAGAAGACAACGACGACGACGTCGAGGACGGTTTCATTGAGCATGGTGAAGCCGACCTTGGTGCTGAGGATGTTGTTGGTCGTCGTCACAGGCATTTTCACGAACCGGCGGCGTTTCGTTCCCGTGTGGGTGCTGAAGAGTATCTTGATTTCATGCAAGAGAAGTATTCTAACCCTCGTGCTGAATATGACGATGATGATGATTATGAAGATGAAGAAGCCGTTACCGAGGTTGATCAACAATCTCTTTTGCCATCAGTCCGTGACCCGAAGCTGTGGATGGTGAAATGTGCGATTGGTCGTGAAAGAGAGGTTGCTGTTTGTCTAATGCAAAAAGCCGTGGATAGAGGATCAGATTTCAAGATCAAATCTGTTATTGCGCTTGATCATCTTCAGAACTTTATATACATTGAAGCGGATATGGAAGCTCACGTTAAAGAGGCTATCAAGGGCATGCGGAATATCTTTGCAAATCATAAGATTTTACTTGTTCCGATAAGAGAAATGGCAGATGTTCTTTCTGTAAGGAGTAAGACACTTGAGCTAGCGCGTGACACATGGGTTAGAATGAAACTTGGGATATATAAGGGTGATCTAGCTCAGGTTGTTGATGTTGATGATGTGCGTAGGAGGGTCACAGTCAAGTTAATCCCAAGAATTGATCTGCAGCTTCTAGCCGATAAGCAGGAAGGAAGTGTGATTGTGAAGAAGAAAGCTTTTGTTCCACCTCCACGCTTCATGAACGTGGATGAGGCAAGGGAACTTCACATACGCGTTGAGCGCCGACGTGACCGGATGACGGGTGATTACTTTGAAAACATCGGTAACATGCTTTTCAAAGATGGCTTCCTGTACAAGAAAGTATCGACCAAGTCGATTTCTACTCTGAACGTTACACCGACCTTCGATGAGCTTGAGAGGTTTAAGAAAGCAAACGAAAACGGGGAGATCGACTTTGTTGATATGTCAACTTTATTTGCGAATAGGAAAAAGGGTCATTTCATGAAAGGCGATGAGGTTATTGTGATCAAGGGAGATTTAAAAAATATGAAGGGTTGGGTTGAGAGAGTAGACGAAGAGAATGTTCTTATCAGATCAGAGATGAAAGGTCTTAATAATCCTCTTGCTGTAAACGAGAGAGAGCTTTGCAAGTACTTTGAACCTGGGAATCATGTGAAGGTTGTTTCTGGCACCCATAAAGAAGCAACCGGCATGGTTGTCAAAGTTGATCAGCATGTGCTTTTCCTTCTAACTGATACGACCAAGCAACAGATTCGTGTCTTCGCTGATCACGTCGTGAAGAGTGCAGAAGTGACTAATGGTGTCACAAAAATGGGAGAGTATGAGCTTCATGATCTTGTGCTTCTAAGCAACTTGAGCTTTGGAGTTATCATAAAACTTGATAATGAAGCTATCCAGGTTCTTAAAGGGGTTCCTGGAAGACCGGAGCTAGCTATTGTCAAACACGGGGAAATAAAGTACAAGATTGAGAAGAAGACCACTGTGAAAGACCGTTACAAAAATGTTATGACGGTTAAAGATGTTGTCAGGGTCACTGAGGGTCCTAGCAAAGGTAAACAAGGTCCAGTGATGCACATCTACAAAGGAGTGTTGTTTTTACATGACCGGCATAACGTTGAGCACGCTGGATTTGTCTGCGTTAAATGCTCATCTTGTGTTCTTTCCGGTGGATCATATTCTGGCGCTGACAGAATTGTTGATTCTTTCTCAAGGTTGGCCAATTCCAAGCCACCAGCCCCTGTGCCTCCATCTCCAAGAAGATTTCAACGGGCAGACTTGGGATATAACTCTGGATCTGGAGGAAGACATTGGAGTGGAAGAGGAGGAAGGGGTAACGACCTTTTGGTAGGTGCTTATGTGAGAGTTCGTCTGGGGCCTTACAAGGGATATAGAGGTCGCATAGTAGAAGTCAAAGAGAAGACAGTGCGTTTGGAACACGAGGCAAAGATTGTGACAGTTAATAGGGACGCGATAGCAGATGGGAATGATAACGTAGCGACACCCTCTCAGTATAATATGGGGAGCCAAACTCCTATGCATCCTTCCCGGACTCCACTTCATCCTTGTATGACTCCAATGCGGGATTCTGGAGGTTTGTTACCTTCAGCTACACCTATCCATAGTGGAATGAGGACACCCATGCGTGATAGAGCTTGGAATCCTTACACGCCTATGAGTCCTCCTCGGGATAGCTGGGAAGATGGAAACCCAGGATCATGGGGAACAAATTCACTGTATCCGCCGGAGAGTCCTTATTCGCGGCCACATGAAGCAGCTACGCCTGGATCAGGGTGGGATAGTAGCACTCCTGGTCGTAGTTATAGTGATGCTGGAACACCAAGAGATGCTAATGTCCCAAGTCCTTATCAACCTATGACACCAAGCTCGGCTTCCTACCTACCTAGCACCCCTGGAGGACAACCAATGACTCCTGGAGCTGATCTCGATGTCAAGTCTCCTGATATAGGTGGGGACGCAGAAACATGGTTGATGCCTGGTATTTTGGTCAGTGTACACAAGGCCGGAGGAGATAGCCATGCGGGAGTCATCCGAGATGTTCTTCCGGATGGGTCCTGTCTAATCGCTCGTGGAGACAGAGGTGAAGGCGAAACTGTTATGGCGATACAGAGCGAAGTGAGGTTAGTTTGTCCGAGGAAGAACGAGCGAGTGAAGGTTGTAGGAGGCAAGCATCGTGGTTCATTAGCTAAGCTCATTGGTCTGGACGGATCTGACGGTATAGTCAAGCTAGATGACACTCTCGACGTCAAGATTCTAGACCTGGGTTTATTAGCCAAGCTAGCCATGCGTGACTGA

Protein:   MAHHSDSDDEDYSYDDESEFDEEEEEEPRSSRKKRGRSNPDSVPGGARGKKRKPSGSIFIEDDVIVDDEEDNDDDVEDGFIEHGEADLGAEDVVGRRHRHFHEPAAFRSRVGAEEYLDFMQEKYSNPRAEYDDDDDYEDEEAVTEVDQQSLLPSVRDPKLWMVKCAIGREREVAVCLMQKAVDRGSDFKIKSVIALDHLQNFIYIEADMEAHVKEAIKGMRNIFANHKILLVPIREMADVLSVRSKTLELARDTWVRMKLGIYKGDLAQVVDVDDVRRRVTVKLIPRIDLQLLADKQEGSVIVKKKAFVPPPRFMNVDEARELHIRVERRRDRMTGDYFENIGNMLFKDGFLYKKVSTKSISTLNVTPTFDELERFKKANENGEIDFVDMSTLFANRKKGHFMKGDEVIVIKGDLKNMKGWVERVDEENVLIRSEMKGLNNPLAVNERELCKYFEPGNHVKVVSGTHKEATGMVVKVDQHVLFLLTDTTKQQIRVFADHVVKSAEVTNGVTKMGEYELHDLVLLSNLSFGVIIKLDNEAIQVLKGVPGRPELAIVKHGEIKYKIEKKTTVKDRYKNVMTVKDVVRVTEGPSKGKQGPVMHIYKGVLFLHDRHNVEHAGFVCVKCSSCVLSGGSYSGADRIVDSFSRLANSKPPAPVPPSPRRFQRADLGYNSGSGGRHWSGRGGRGNDLLVGAYVRVRLGPYKGYRGRIVEVKEKTVRLEHEAKIVTVNRDAIADGNDNVATPSQYNMGSQTPMHPSRTPLHPCMTPMRDSGGLLPSATPIHSGMRTPMRDRAWNPYTPMSPPRDSWEDGNPGSWGTNSLYPPESPYSRPHEAATPGSGWDSSTPGRSYSDAGTPRDANVPSPYQPMTPSSASYLPSTPGGQPMTPGADLDVKSPDIGGDAETWLMPGILVSVHKAGGDSHAGVIRDVLPDGSCLIARGDRGEGETVMAIQSEVRLVCPRKNERVKVVGGKHRGSLAKLIGLDGSDGIVKLDDTLDVKILDLGLLAKLAMRD